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Scoring Card Method Membrane Transport Proteins : Identifying and characterizing membrane transport proteins using propensity scores of dipeptides

Home | Download | Release 0.2, Last update: Jul 10, 2015 

The Licence information are containing in README and LICENCE file

SCM Tools and Source Code:

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SCM-VISU Source Code:

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SCMMTP:

The Optimized Scorecard for membrane transport proteins

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Dataset:

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Contact with:
Hui-Ling Huang, Shinn-Ying Ho

Related publications of SCM

Huang HL, Charoenkwan P, Kao TF, Lee HC, Chang FL, Huang WL, Ho SJ, Shu LS, Chen WL, Ho SY: Prediction and analysis of protein solubility using a novel scoring card method with dipeptide composition. Bmc Bioinformatics 2012, 13.

Charoenkwan P, Shoombuatong W, Lee HC, Chaijaruwanich J, Huang HL, Ho SY: SCMCRYS: Predicting Protein Crystallization Using an Ensemble Scoring Card Method with Estimating Propensity Scores of P-Collocated Amino Acid Pairs. Plos One 2013, 8(9).

Tamara Vasylenko, Yi-Fan Liou, Hong-An Chen, Phasit Charoenkwan, Hui-Ling Huang* and Shinn-Ying Ho*, SCMPSP: Prediction and characterization of photosynthetic proteins based on a scoring card method, BMC Bioinformatics, 16 (Suppl 1):S8, 2015

Yi-Fan Liou, Phasit Charoenkwan, Yerukala Sathipati Srinivasulu, Tamala Vasylenko, Shih-Chung Lai, Hua-Chin Lee, Yi-Hsiung Chen, Hui-Ling Huang* and Shinn-Ying Ho*, "SCMHBP: Prediction and analysis of heme binding proteins using propensity scores of dipeptides," BMC Bioinformatics, 15 Suppl 16:S4, Dec. 2014.